I always believed science manipulation was inferior to magic, but when you actually look at it, science manipulation is probably superior to all forms of magic (save Almighty Magic, Meta Magic, and all that nonsense), as it literally contains logic manipulation, which in and of itself grants you omnipotence, omnipresence, and omniscience. The three O’s! Science manipulation is basically level to Almighty Magic, so neither are more powerful than the other.
Yes, I know that Almighty Magic is a direct form of omnipotence, but logic manipulation grants you basic omnipotence, as well. If they were to fight, neither would technically win. However, I could be wrong, so correct me if I am.